Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
300038 | CP076300038 | Zambia | 2008 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10V, I15V, L19I, E35D, M36I, R41K, K45KR, L63V, H69K, T74S, L89M, I93L |
>CP076300038| codons 1-99 PQITLWQRPVVTIKVGGQIKEALLDTGADDTVLEDINLPGKWKPRMIGGIGGFIKVRQYD QIVIEICGKKAIGSVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V8I, V35T, E36A, T39E, K122E, K173IV, Q174K, D177E, T200X, Q207E, R211K, V245X, D250DE, A272P, K277KR, T286TA, E291D, V292I, I293V, E328K |
>CP076300038| codons 1-328 PISPIETIPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRVKNPEIVI YQYMDDLYVGSDLEIGQHRXKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIXLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAK |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance mutations are present in six percent of persons initiating antiretroviral therapy in Lusaka, Zambia. | JAIDS, 2010 |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |