Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| MC07ZA | MC07ZA | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I15K, L19T, K20R, M36I, R41K, I62V, L63S, H69K, L89M, I93L |
| >MC07ZA| codons 1-99 PQITLWQRPLVSIKKGGQTREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QVSIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K20R, V35T, E36A, T39E, S48T, S162C, K173A, Q174K, I178L, T200A, Q207D, R211K, V245Q, A272P, K281R, T286A, E291D, V292I, I293V, V317A, Q334N, G335D, R356K, R358S, G359T, E370Q, T377I, K390R, A400T, E404D |
| >MC07ZA| codons 1-434 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRAKNPDLVI YQYMDDLYVGSDLEIGQHRAKIEELRDHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGAKALTDIVPLTEEAE LELAENREILKEPVHGAYYDPSKDLIAEIQKQGNDQWTYQIYQEPFKNLKTGKYAKMSTA HTNDVKQLTQAVQKIAIESIVIWGKTPKFRLPIQKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEPI |
References
| Author | Title | Citation |
| Nwobegahay, JM | Low prevalence of transmitted genetic drug resistance in a cohort of HIV infected naïve patients entering antiretroviral treatment programs at two sites in northern South Africa. | J Med Virol, 2012 |