Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| MC02ZA | MC02ZA | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I15V, L19I, K20R, M36I, P39Q, R41K, Q61N, L63Q, H69K, L89M, I93L |
| >MC02ZA| codons 1-99 PQITLWQRPLVSIKVGGQIREALLDTGADDTVLEEINLQGKWKPKMIGGIGGFIKVRQYD NIQIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K103N | A98G | V35T, T39E, S48T, V60I, K122E, D123N, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, D250E, A272P, K277R, L283I, T286A, E291D, I293V, I329L, Q334D, G335D, R356K, M357R, R358K, G359S, K366R, I375V, A376G, T377L, T386I, K390R, A400L, E404D |
| >MC02ZA| codons 1-432 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICEEMEKEGKITKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLKKNKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLIRGAKALTDVVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAELQKQGDDQWTYQIYQEPFKNLKTGKYAKRKSA HTNDVRQLTEAVQKVGLESIVIWGKIPKFRLPIQKETWELWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKE |
References
| Author | Title | Citation |
| Nwobegahay, JM | Low prevalence of transmitted genetic drug resistance in a cohort of HIV infected naïve patients entering antiretroviral treatment programs at two sites in northern South Africa. | J Med Virol, 2012 |