Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| MC01ZA | MC01ZA | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I15V, L19I, M36I, N37T, R41K, L63S, H69K, L89M, I93L |
| >MC01ZA| codons 1-99 PQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEEITLPGKWKPKMIGGIGGFIKVRQYD QISIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E36A, T39E, E44G, S48T, D121H, K122E, I142V, K173S, Q174K, D177E, I178L, T200A, Q207E, R211K, V245Q, A272P, T286A, E291D, V292I, P313Q, Q334N, G335D, A355S, R356K, G359T, T377M, K390R, A400T, E404D, V435M | G45R |
| >MC01ZA| codons 1-435 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKGRKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL HEDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSKNPELVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIIPLTEEAE LELAENREILKEQVHGVYYDPSKDLIAEIQKQGNDQWTYQIYQEPFKNLKTGKYSKMRTA HTNDVKQLTEAVQKIAMESIVIWGKTPKFRLPIQKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEPIM |
References
| Author | Title | Citation |
| Nwobegahay, JM | Low prevalence of transmitted genetic drug resistance in a cohort of HIV infected naïve patients entering antiretroviral treatment programs at two sites in northern South Africa. | J Med Virol, 2012 |