Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| BBCR53ZA | BBCR53ZA | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I13V, L19I, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L |
| >BBCR53ZA| codons 1-99 PQITLWQRPLVSVKIGGQIKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QIPIEICGKKAIGTVLVGPTPINIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| T27S, V35T, E36A, T39E, S48T, P119T, K126N, Q145E, K173A, D177G, T200A, I202V, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, P294A, Q334H, G335D, R356K, G359T, I375V, T377Q, S379C, K390R, A400T, E404D | Y127N |
| >BBCR53ZA| codons 1-433 PISPIETVPVKLKPGMDGPKVKQWPLSEEKIKALTAICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVTL DKDFRNNTAFTIPSINNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPGIVI YQYMDDLYVGSDLEIGQHRAKVEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVALTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPFKNLKTGKYAKMRTA HTNDVKQLTEAVQKVAQECIVIWGKTPKFRLPIQKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEP |
References
| Author | Title | Citation |
| Nwobegahay, JM | Low prevalence of transmitted genetic drug resistance in a cohort of HIV infected naïve patients entering antiretroviral treatment programs at two sites in northern South Africa. | J Med Virol, 2012 |