Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| BBCR42ZA | BBCR42ZA | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I15V, L19I, E35D, M36I, N37E, R41K, D60E, Q61E, L63A, H69K, L89M, I93L |
| >BBCR42ZA| codons 1-99 PQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEDIELPGKWKPKMIGGIGGFIKVRQYE EIAIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E36A, T39E, S48T, V60I, K122E, D123G, I135T, K173A, D177E, I178L, T200A, E204K, Q207E, F214L, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V | Q91K |
| >BBCR42ZA| codons 1-307 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVKLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEGFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPELVI YQYMDDLYVGSDLEIGQHRAKIEKLREHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEAE LELAENR |
References
| Author | Title | Citation |
| Nwobegahay, JM | Low prevalence of transmitted genetic drug resistance in a cohort of HIV infected naïve patients entering antiretroviral treatment programs at two sites in northern South Africa. | J Med Virol, 2012 |