Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
BBVCT09ZA | BBVCT09ZA | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12S, I15V, L19I, K20R, M36I, R41K, R57K, L63S, H69K, I93L |
>BBVCT09ZA| codons 1-99 PQITLWQRPLVSIKVGGQIREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVKQYD QISIEICGKKAIGTVLVGPTPVNIIGRNLLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, T39E, S48T, K82R, A98S, K122E, I135K, Y144F, K173A, D177E, V179I, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, V292I, I293V | Q145K |
>BBVCT09ZA| codons 1-322 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNRRTQDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSKNNETPGIRFKYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPEIII YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKEDWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEIVPLTEEAE LELAENREILKEPVHGVYYDPS |
References
Author | Title | Citation |
Nwobegahay, JM | Prevalence of drug-resistant mutations in newly diagnosed drug-naive HIV-1-infected individuals in a treatment site in the Waterberg district, Limpopo province. | S Afr Med J, 2011 |