Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| KECst_004 | KECst_004 | Kenya | 2006 | HIV1 | A | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, V60I, S68G, K173A, Q174K, D177E, V179I, I195K, Q207A, R211S, F214L, H221Y, D250E, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E312S, S322A, G335D, M357K, G359S, T369S, I375V, A376T, T377L, T386A, A400T, T403M, E404D, E432D, V435I, V467I, D471E, Q480H, L491S, I495V, Q524K, K527E, E529D, A534S, A554S | K275T |
| >KECst_004| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI FAIKKKDGTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIII YQYMDDLYVGSDLEKGQHRTKIEELRAHLLSWGLTTPDKKYQKEPPFLWMGYELHPDKWT VQPIVLPEKESWTVNDIQKLVGKLNWASQIYPGITVRQLCKLLRGAKALTDIVTLTEEAE LELAENREILKSPVHGVYYDPAKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRSA HTNDVKQLSEAVQKVTLESIVIWGKAPKFKLPIQKETWETWWMDYWQATWIPEWEFVNTP PLVKLWYQLEKDPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTETTNQKTELH AIHLALQDSGSEVNVVTDSQYALGIIQAQPDKSESELVSQIIEKLIEKDKVYLSWVPAHK GIGGNEQVDKLVSSGIRKVL |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K20R, E35D, M36I, N37D, R41K, K45R, H69K, L89M |
| >KECst_004| codons 1-99 PQITLWQRPLVTVKIGGQLREALLDTGADDTVLEDIDLPGKWKPRMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, S24N, V31I, I72V, L74I, T112V, I113V, T124A, T125A, K136Q, D167E, V201I | S283G |
| >KECst_004| codons 1-288 FLDGIDKAQEEHERYHSNWRAMANDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN FTSAAVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
References
| Author | Title | Citation |
| Tovanabutra, S | Evaluation of HIV type 1 strains in men having sex with men and in female sex workers in Mombasa, Kenya. | ARHR, 2010 |