Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| KECst_005 | KECst_005 | Kenya | 2006 | HIV1 | A | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M |
| >KECst_005| codons 1-99 PQITLWQRPLVTVRIGGQLREALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVKQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E36D, V60I, K122E, D123S, I135T, K173S, Q174K, V179I, Q207A, V245N, D250E, A272P, T286A, E291D, V292I, I293V, P294T, E297K, E312N, D324E, G335D, M357K, G359A, K366R, T369A, A371V, I375V, A376V, T377L, A400T, T403M, E404D, E432D, V435A, S468P, D471E, K476R, Q480H, H483Y, L491S, K512R, E514D, S519N, Q524K, K527G, E529D, A554S |
| >KECst_005| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSKNPDIII YQYMDDLYVGSDLEIGQHRTKIEELRAHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPINLPEKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVTLTKEAE LELAENREILKNPVHGVYYDPSKELIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRAA HTNDVRQLAEVVQKVVLESIVIWGKTPKFKLPIQKETWETWWMDYWQATWIPEWEFVNTP PLVKLWYQLEKDPIAGAETFYVDGAANRETKLGKAGYVTDRGRQKVVPLTETTNQRTELH AIYLALQDSGSEVNIVTDSQYALGIIQAQPDRSDSELVNQIIEKLIGKDKVYLAWVPAHK GIGGNEQVDKLVSSGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, A21T, V31I, S39N, I72V, T112V, I113V, T124A, T125A, G134N, D167E, V201I, T218I, L234I, I251V, V259I | S283G |
| >KECst_005| codons 1-288 FLDGIDKAQEEHERYHSNWRTMASDFNLPPIVAKEIVANCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN FTSAAVKAACWWANIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVVQDNSDIKIVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
References
| Author | Title | Citation |
| Tovanabutra, S | Evaluation of HIV type 1 strains in men having sex with men and in female sex workers in Mombasa, Kenya. | ARHR, 2010 |