Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
TJC2434999 | TJC2434999 | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | 3TC+AZT+EFV | NA |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V | Y188L | V35T, E36A, T39E, S48T, V60I, K122E, D123G, I135V, S162A, K173A, Q174A, D177E, T200A, Q207E, R211K, V245Q, S251I, A272P, K281R, T286A, E291D, V292I |
>TJC2434999| codons 1-333 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEGFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRAANPEIVI YQYVDDLLVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDIWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGAKALTDIIPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQG |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12S, I15V, L19I, M36I, R41K, D60E, H69K, L89M, I93L |
>TJC2434999| codons 1-99 PQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYE QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
References
Author | Title | Citation |
Wallis, CL | Varied HIV drug resistance patterns among patients on failing antiretroviral therapy in the South African national roll-out programme. | JAIDS, 2009 |