<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
HU_0172 HU_0172 Chad 2006 HIV1 D Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I15V, E35D, M36I, N37E, R41K, R57RK, D60E, I64V, C67S  
>HU_0172| codons 1-99
PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDIELPGKWKPKMIGGIGGFIKVKQYE
QILVEISGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        V35T, E40D, K49R, V60I, S162C, D177E, I178L, G196E, Q207EG, R211KT, V245KQ, E248ED, D250DE, S251SDGN, A272P, I274IV, K275R, Q278QH, K281R, E291D, V292I, I293V, E297A, K311R, V317A, Q334QH  
>HU_0172| codons 1-341
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPELVI
YQYMDDLYVGSDLEIEQHRTKIEELRGHLLTWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQLPDKENWTVNDIQKLVGKLNWASQIYPGVRVKHLCRLLRGTKALTDIVPLTAEAE
LELAENREILREPVHGAYYDPSKDLIAEIQKQGHGQWTYQI

References
Author Title Citation
Aghokeng, AF Evaluation of transmitted HIV drug resistance among recently-infected antenatal clinic attendees in four Central African countries. Antivir Ther, 2009