<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
HG_0344 HG_0344 Chad 2006 HIV1 CRF01_AE Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, G17E, E35D, M36I, R41K, I62IV, L63S, H69K, L89M  
>HG_0344| codons 1-99
PQITLWQRPLVTVKIGEQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD
QVSIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, K11A, V35T, T39K, K43E, S162C, K173A, Q174K, D177E, Q207A, R211S, K238R, V245E, E248D, K277R, K281KR, T286A, E291D, V292I, I293V, E312T, S322V, I326V, G333GE, Q334K, G335N  
>HG_0344| codons 1-341
PISPIDTVPVALKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRAKNPEIVI
YQYMDDLYVGSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDRWT
VQPIELPDKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCRLLRGAKALTDIVPLTEEAE
LELAENREILKTPVHGVYYDPVKDLVAEIQKQEKNQWTYQI

References
Author Title Citation
Aghokeng, AF Evaluation of transmitted HIV drug resistance among recently-infected antenatal clinic attendees in four Central African countries. Antivir Ther, 2009