<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
CDE0042 CDE0042 Cameroon 2007 HIV1 CRF02_AG Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L10M, V11T, I13V, L19I, K20I, E35D, M36I, R41K, L63H, H69K, I72V, L89M K70P
>CDE0042| codons 1-99
PQITLWQRPMTTVKIGGQIIEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD
QIHIEICGKPAVGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        K11S, V35T, V60I, D123S, I135T, K173A, D177G, G196E, T200A, Q207A, R211K, I244IV, V245Q, E248D, A272P, K281R, E291D, V292I, I293V, P294T, E297K, E312D, S322E, D324E, I329L, G335D, M357K, G359S, K366R, T369A, K390R, K395R, A400T, T403M  
>CDE0042| codons 1-426
PISPIETVPVSLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DKSFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPGIVI
YQYMDDLYVGSDLEIEQHRAKIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPVQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGTKALTDIVTLTKEAE
LELAENREILKDPVHGVYYDPEKELIAELQKQGQDQWTYQIYQEPFKNLKTGKYARKRSA
HTNDVRQLAEAVQKIATESIVIWGKTPKFRLPIQRETWETWWMEYWQATWIPEWEFVNTP
PLVKLW

References
Author Title Citation
Aghokeng, AF Evaluation of transmitted HIV drug resistance among recently-infected antenatal clinic attendees in four Central African countries. Antivir Ther, 2009