<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
R42 R42_PR Vietnam 2007 HIV1 CRF01_AE Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, G16E, K20R, E35D, M36I, N37D, R41K, C67W, H69K, K70R, L89M G49E
>R42_PR| codons 1-99
PQITLWQRPLVTVKIEGQLREALLDTGADDTVLEDIDLPGKWKPKMIGEIGGFIKVRQYD
QILIEIWGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        K20Q, I31IM, K32KE, V35T, T39KR, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, Y232YH, D237A, K238RS, T240TP, V241VL, Q242QHL, V245AEPQ, L246LIM K22EG, Q23QL, W239W*CY, I244IFLV
>R42_RT| codons 17-246
DGPQVGLWPLTEEKMEALTEICREMEEEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVD
FRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSIN
NETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRIKNPEMVIYQYMDDLYVGSDLEIG
QHRTKIEELRSHLLSWGFTTPDKKHQKEPPFLWMGHELHPASYPLLPVQM

References
Author Title Citation
Ayouba, A Low prevalence of HIV type 1 drug resistance mutations in untreated, recently infected patients from Burkina Faso, Cote d'Ivoire, Senegal, Thailand, and Vietnam: The ANRS 12134 study. ARHR, 2009