Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CR242 | US2006CR242 | U.S. | 2006 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M184V | K102R, T139K, D177E, I178M, V179I, R211K, F214FL, H235HR, V245E, T286A, A288AV, E291ED, I293IM, E297K, A304E |
| >US2006CR242| codons 1-305 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSINNEKPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMII YQYVDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELRPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKVLTDVMPLTKEAE LELEE |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L19I, N37NS, I62V, L63P, H69Q, K70E, A71T, I72V, V77I, Q92R |
| >US2006CR242| codons 1-99 PQITLWQRPLVTIKIGGQIKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYD QVPIEICGQETVGTVLIGPTPVNIIGRNLLTRIGCTLNF |
References
| Author | Title | Citation |
| Smith, DM | A public health model for the molecular surveillance of HIV transmission in San Diego, California. | AIDS, 2009 |