Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CR223 | US2007CR223 | U.S. | 2007 | HIV1 | D | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I15V, L19I, M36I, R41K, I62V, L63A, I72T, I85IV, L89F |
| >US2007CR223| codons 1-99 PQITLWQRPLVTIKVGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QVAIEICGHKATGTVLVGPTPVNIVGRNFLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| P4T, I5V, K20R, V35T, T39A, E40D, K49R, V60I, T107S, V111VI, A158S, T165I, K173KR, Q207E, F214L, V245Q, D250E, A272P, K277R, T286A |
| >US2007CR223| codons 1-305 PISTVETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICADMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVSVLDIGDAYFSVPL DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMIKILEPFRRQNPDIVI YQYMDDLYVGSDLEIGQHRTKIEELREHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTEEAE LELAE |
References
| Author | Title | Citation |
| Smith, DM | A public health model for the molecular surveillance of HIV transmission in San Diego, California. | AIDS, 2009 |