Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CR178 | US2006CR178 | U.S. | 2006 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M184V | K103N | E28K, D123E, I135T, S162C, D177E, T200A, I202V, V245E, I293V, P294Q | Y232H |
| >US2006CR178| codons 1-305 PISPIETVPVKLKPGMDGPKVKQWPLTKEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPEIVI YQYVDDLYVGSDLEIGQHRAKVEELRQHLLRWGFTTPDKKHQKEPPFLWMGHELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVVQLTEEAE LELAE |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| D30N | K14R, G16GE, G17D, N37T, Q61H, L63R, I64V, T74S, V77I | K70V |
| >US2006CR178| codons 1-99 PQITLWQRPLVTIRIEDQLKEALLDTGADNTVLEEMTLPGRWKPKMIGGIGGFIKVRQYD HIRVEICGHVAIGSVLIGPTPVNIIGRNLLTQIGCTLNF |
References
| Author | Title | Citation |
| Smith, DM | A public health model for the molecular surveillance of HIV transmission in San Diego, California. | AIDS, 2009 |