Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CR172 | US2006CR172 | U.S. | 2006 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12TA, I15V, M36L, N37T, P39PS, R57K, I62IMV, L63P, I72IV |
| >US2006CR172| codons 1-99 PQITLWQRPLVAIKVGGQLKEALLDTGADDTVLEELTLSGRWKPKMIGGIGGFIKVKQYD QVPIEICGHKAVGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35IT, K122E, I135IT, K166KR, D192DN, K201KR, R211RK, E248D, D250E, K277R, A288S, I293V, E297Q |
| >US2006CR172| codons 1-305 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVI YQYMDDLYVGSNLEIGQHRTRIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPDKESWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVVPLTQEAE LELAE |
References
| Author | Title | Citation |
| Smith, DM | A public health model for the molecular surveillance of HIV transmission in San Diego, California. | AIDS, 2009 |