<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
CR154 US2006CR154 U.S. 2006 HIV1 B Plasma None

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
      V179D K20KR, E28A, T69S, A98S, K102KEGR, K103R, L109LIM, I142IT, E169EK, I178M, I180V, T200A, R211T, T286TA  
>US2006CR154| codons 1-305
PISPIETVPVKLKPGMDGPRVKQWPLTAEKIKALVEICTEMEKEGKISKIGPENPYNTPV
FAIKKKDSSKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKRRKSVTVMDVGDAYFSVPL
DKDFRKYTAFTIPSINNETPGTRYQYNVLPQGWKGSPAIFQSSMTKILKPFRKQNPDMDV
YQYMDDLYVGSDLEIGQHRAKIEELRQHLLTWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVIPLTEEAE
LELAE

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L33V, E35D, N37I, R57K, L63P, I72IT, T80TA, I93L  
>US2006CR154| codons 1-99
PQITLWQRPLVTIKIGGQLKEALLDTGADDTVVEDMILPGRWKPKMIGGIGGFIKVKQYD
QIPIEICGHKATGTVLVGPAPVNIIGRNLLTQLGCTLNF

References
Author Title Citation
Smith, DM A public health model for the molecular surveillance of HIV transmission in San Diego, California. AIDS, 2009