Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CR154 | US2006CR154 | U.S. | 2006 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V179D | K20KR, E28A, T69S, A98S, K102KEGR, K103R, L109LIM, I142IT, E169EK, I178M, I180V, T200A, R211T, T286TA |
| >US2006CR154| codons 1-305 PISPIETVPVKLKPGMDGPRVKQWPLTAEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSSKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKRRKSVTVMDVGDAYFSVPL DKDFRKYTAFTIPSINNETPGTRYQYNVLPQGWKGSPAIFQSSMTKILKPFRKQNPDMDV YQYMDDLYVGSDLEIGQHRAKIEELRQHLLTWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVIPLTEEAE LELAE |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L33V, E35D, N37I, R57K, L63P, I72IT, T80TA, I93L |
| >US2006CR154| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVVEDMILPGRWKPKMIGGIGGFIKVKQYD QIPIEICGHKATGTVLVGPAPVNIIGRNLLTQLGCTLNF |
References
| Author | Title | Citation |
| Smith, DM | A public health model for the molecular surveillance of HIV transmission in San Diego, California. | AIDS, 2009 |