Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CR129 | US2006CR129 | U.S. | 2006 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| K20R, E35D, M36L, N37D, I62V, L63S, I64V, I72V |
| >US2006CR129| codons 1-99 PQITLWQRPLVTIKIGGQLREALLDTGADDTVLEDLDLPGRWKPKMIGGIGGFIKVRQYD QVSVEICGHKAVGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41L, L210LW, T215Y | K103S, V106A | V35IMT, T39TA, K43KN, D86E, V118VI, I142T, I202V, E203EDKN, H221HY, K223KQ, V245VM, A272S, R284RK, T286A, I293IV, E297A |
| >US2006CR129| codons 1-305 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICAELENEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQEFWEVQLGIPHPAGLKKSKSATVLDVGDAYFSIPL DKDFRKYTAFTIPSINNETPGTRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRTKVNELRQHLWRWGFYTPDKKYQQEPPFLWMGYELHPDKWT VQPIMLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVKQLCKLLKGAKALTEVVPLTAEAE LELAE |
References
| Author | Title | Citation |
| Smith, DM | A public health model for the molecular surveillance of HIV transmission in San Diego, California. | AIDS, 2009 |