Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| PI11 | US2001PI11 | U.S. | 2001 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L90M | K14R, L19I, L63P, A71T, I72V, I93L |
| >US2001PI11| codons 1-99 PQITLWQRPLVTIRIGGQIKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYD QIPIEICGHKTVGTVLVGPTPVNIIGRNLMTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K70R, M184V | Y181C | T69N, V90I, I135T, I142V, S162Y, Q207E, E224D, A272P, K277R, T286A, I293V |
| >US2001PI11| codons 1-305 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSNRWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQYSMTKILEPFRKQNPDIVI CQYVDDLYVGSDLEIGQHRTKIEELREHLLRWGFTTPDKKHQKDPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVVPLTEEAE LELAE |
References
| Author | Title | Citation |
| Smith, DM | A public health model for the molecular surveillance of HIV transmission in San Diego, California. | AIDS, 2009 |