Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
82 | 07p82-2 | Thailand | 2007 | HIV1 | CRF01_AE | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | 3TC+AZT+LPV | 92 |
2 | 3TC+ABC+AZT | 104 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, I15V, E35D, M36I, R41K, H69K, L89M |
>07p82-2| codons 1-99 PQITLWQRPLVTVKVGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V, T215F | E6D, V8I, K11T, V35T, T39K, K122E, D123S, I178M, T200A, Q207A, R211S, V245E, E291A, E312T, I326V, I329V |
>07p82-2| codons 1-334 PISPIDTIPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDMVI YQYVDDLYVGSDLEIGQHRAKIEELRAHLLSWGFFTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTAVIPLTEEAE LELAENREILKTPVHGVYYDPSKDLVAEVQKQGQ |
References
Author | Title | Citation |
Rosen-Zvi, M | Selecting anti-HIV therapies based on a variety of genomic and clinical factors. | Bioinformatics, 2008 |