Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 71 | 09p71-3 | Congo-Brazzaville | 2009 | HIV1 | C | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | 3TC+AZT+LPV | 12 |
| 2 | 3TC+AZT | 3 |
| 3 | 3TC+ABC+AZT+TDF | 27 |
| 4 | LPV+NVP+TDF | 52 |
| 5 | LPV+TDF | 99 |
| 6 | FTC+LPV+TDF | 12 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I54V, V82A | I15V, Q18E, K20R, E35D, M36I, R41K, K45I, D60E, I62V, L63V, H69K, L89M, I93L |
| >09p71-3| codons 1-99 PQITLWQRPLVTIKVGGELREALLDTGADDTVLEDINLPGKWKPIMIGGIGGFVKVRQYE QVVIEICGKKAIGTVLVGPTPANIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41L | V35T, T39K, K122E, D123S, I142V, K173A, Q174K, D177E, T200A, R211K, E248N, A272P, K277R, T286A, E291D, V292I, I293V, I329L |
| >09p71-3| codons 1-332 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICKELEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPNKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAELQKQ |
References
| Author | Title | Citation |
| Rosen-Zvi, M | Selecting anti-HIV therapies based on a variety of genomic and clinical factors. | Bioinformatics, 2008 |