Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 54 | 09p54-2 | France | 2009 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | 3TC+AZT | 230 |
| 2 | 3TC+D4T+SQV | 9 |
| 3 | 3TC+D4T+NFV | 35 |
| 4 | DDI+IDV+RTV | 31 |
| 5 | DDI+IDV+NVP+RTV | 38 |
| 6 | 3TC+ABC+EFV | 19 |
| 7 | 3TC+ABC+D4T+EFV | 56 |
| 8 | 3TC+ABC+AZT+EFV | 23 |
| 9 | EFV | 11 |
| 10 | 3TC+D4T+LPV+SQV+TDF | 112 |
| 11 | 3TC+LPV+SQV+TDF | 186 |
| 12 | FTC+LPV+SQV+TDF | 99 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I15V, E35D, N37S, L63A |
| >09p54-2| codons 1-99 PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYD QIAIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K122E, I202V, Q207E, A272P, S322T, I329V, Q334E | N306ND |
| >09p54-2| codons 1-335 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRTKVEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVIPLTEEAE LELAEDREILKEPVHGVYYDPTKDLIAEVQKQGEG |
References
| Author | Title | Citation |
| Rosen-Zvi, M | Selecting anti-HIV therapies based on a variety of genomic and clinical factors. | Bioinformatics, 2008 |