Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 47 | 01p47-1 | Germany | 2001 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT | 195 |
| 2 | AZT+DDC | 1 |
| 3 | AZT+DDC+DDI | 92 |
| 4 | AZT | 13 |
| 5 | 3TC+AZT | 65 |
| 6 | 3TC+AZT+SQV | 82 |
| 7 | 3TC+AZT+SQV | 26 |
| 8 | 3TC+AZT+SQV | 121 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I84V, L90M | G73S | L10LI, I13V, K14KR, I15V, Q18QH, K20KIM, N37D, L63P, A71V |
| >01p47-1| codons 1-99 PQITLWQRPIVTVRVGGHLMEALLDTGADDTVLEEMDLPGRWKPKMIGGIGGFIKVRQYD QIPIEICGHKVISTVLVGPTPVNVIGRNLMTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41ML, D67DN, K70R, M184V, T215TNSY | K219Q | T69TN, D121Y, K122E, I135T, S162C, D177E, F214FL, L228LR, A272AS, K277R, T286TA, I293V, E297EA, S322Q |
| >01p47-1| codons 1-323 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKEGKISKIGPENPYNTPV FAIKKKNSNRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPEIVI YQYVDDLYVGSDLEIGQHRTKIEELRQHLLRWGLYTPDQKHQKEPPFRWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVRQLCKLLRGAKALTEVVPLTAEAE LELAENREILKEPVHGVYYDPQK |
References
| Author | Title | Citation |
| Rosen-Zvi, M | Selecting anti-HIV therapies based on a variety of genomic and clinical factors. | Bioinformatics, 2008 |