<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
30 06p30-3 Turkey 2006 HIV1 B Plasma None

Treatment History
Order Regimen Weeks
1 3TC+AZT+EFV 60
2 APV+FTC+RTV+TDF 18

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L10LI, I13IV, K14KR, L63H  
>06p30-3| codons 1-99
PQITLWQRPIVTVRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYD
QIHIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
    K103N P225PH, K238KT K22R, V35M, V118I, K122E, D123E, I142V, T165I, E169D, I178L, T200TA, E203D, F214L, L228LR, A272P, K277R, A288S, E297K, E312T  
>06p30-3| codons 1-335
PISPIETVPVKLKPGMDGPKVRQWPLTEEKIKALMEICTEMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSIPL
DEEFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMIKILDPFRKQNPDLVI
YQYMDDLYVGSDLEIGQHRAKIDELRQHLLRWGLTTPDKKHQKEHPFRWMGYELHPDTWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKSLTEVIPLTKEAE
LELAENREILKTPVHGVYYDPSKDLIAEIQKQGQG

References
Author Title Citation
Rosen-Zvi, M Selecting anti-HIV therapies based on a variety of genomic and clinical factors. Bioinformatics, 2008