Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 23 | 01p23-1 | Unknown | 2001 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT | 54 |
| 2 | None | 13 |
| 3 | AZT | 132 |
| 4 | None | 4 |
| 5 | AZT | 34 |
| 6 | None | 50 |
| 7 | AZT | 2 |
| 8 | AZT+DDI | 5 |
| 9 | AZT | 17 |
| 10 | AZT+D4T | 17 |
| 11 | 3TC+AZT | 4 |
| 12 | 3TC+AZT+IDV | 13 |
| 13 | 3TC+AZT | 7 |
| 14 | 3TC+AZT+SQV | 66 |
| 15 | 3TC+AZT+SQV | 47 |
| 16 | 3TC+AZT+NVP | 8 |
| 17 | 3TC+ABC+AZT+NVP | 3 |
| 18 | 3TC+AZT+NVP | 95 |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K70R, M184V | K219KQ | Y188L | K20KR, K64R, T69N, A98S, K122E, Q207E, F214L, A272PS, K277R, L283I, I293V, E297A |
| >01p23-1| codons 1-320 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIRKKDSNRWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYVDDLLVGSDLEIGQHRTKIEELREHLLRWGLTTPDQKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVRQLCKLIRGTKALTEVVPLTAEAE LELAENREILKEPVHGVYYD |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I15A, E35D, N37D, I62V, L63P, C67CY, A71V, I93L |
| >01p23-1| codons 1-99 PQITLWQRPLVTIKAGGQLKEALLDTGADDTVLEDMDLPGRWKPKMIGGIGGFIKVRQYD QVPIEIYGHKVIGTVLVGPTPVNIIGRNLLTQLGCTLNF |
References
| Author | Title | Citation |
| Rosen-Zvi, M | Selecting anti-HIV therapies based on a variety of genomic and clinical factors. | Bioinformatics, 2008 |