Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 2 | 00p2-2 | Germany | 2000 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT | 26 |
| 2 | AZT+DDI | 9 |
| 3 | 3TC+AZT | 33 |
| 4 | 3TC+AZT+IDV | 11 |
| 5 | AZT+IDV | 13 |
| 6 | D4T+IDV | 8 |
| 7 | AZT+DDI+IDV | 31 |
| 8 | DDI+RTV+SQV | 31 |
| 9 | ABC+D4T+NFV | 2 |
| 10 | ABC+D4T+EFV+NFV | 48 |
| 11 | ABC+EFV+NFV | 22 |
| 12 | None | 23 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| K14KR, R41K, R57K, L63P, A71T, I72IV, I93L |
| >00p2-2| codons 1-99 PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVKQYD QIPIEICGHKTVGTVLVGPTPVNIIGRNLLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| L210LW, T215TNSY | K101KPQT, K103KN | T39TA, E44ED, T69TA, A98AS, V118VI, K122KE, I135T, S162C, Q207QE, R211RK, L228LH, V245E, L283I, I293V |
| >00p2-2| codons 1-324 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICAEMEKDGKISKIGPENPYNTPV FAIKKKDSAKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLTKNKSVTVLDVGDAYFSIPL DEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRTKIEELREHLWKWGFYTPDKKHQKEPPFHWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLIRGTKALTEVVPLTEEAE LELAENREILKEPVHGVYYDPSKD |
References
| Author | Title | Citation |
| Rosen-Zvi, M | Selecting anti-HIV therapies based on a variety of genomic and clinical factors. | Bioinformatics, 2008 |