Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA5622 | CA13900 | U.S. | 1999 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT | 104 |
2 | 3TC+AZT+IDV | 208 |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V, T215Y | I135V, I142V, V179I, E203EG, Q207E, V245T, E248V | K154K*, V189VL |
>CA13900| codons 1-258 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSVNNETPGVRYQYNVLPQGW*GSPAIFQSSMTKILEPFRKQNPDIII YQYVDDLYLGSDLEIGQHRTKIGELREHLLRWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPITLPVKDSWTVNDIQ |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
M46I, L90M | G73S | I13IV, R41K, I62V, L63P, I66IL, A71AV, I72L, V77I, I93L |
>CA13965| codons 11-99 VTVKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKIIGGIGGFIKVRQYDQVPIELCGHK VLSTVLIGPTPVNIIGRNLMTQLGCTLNF |
References
Author | Title | Citation |
Gonzales, MJ | HIV-1 reverse transcriptase and protease subtypes: Classification, amino acid mutation patterns, and prevalence in a northern California clinic-based population. | J Infect Dis, 2001 |