Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| HT247 | 06TG.HT247 | Togo | 2006 | HIV1 | CRF02_AG | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T4P, Q7D, L10V, T12A, I13V, K14R, G16E, K20I, E35G, M36I, R41K, R57K, L63H, H69K, P79S, L89M |
| >06TG.HT247| codons 1-99 PQIPLWDRPVVAVRIEGQLIEALLDTGADDTVLEGINLPGKWKPKMIGGIGGFIKVKQYD QIHIEICGKKAIGTVLVGSTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| T215A | E6D, K20R, V35T, E36D, V60I, T69S, K122E, D123N, I135V, A158S, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, K277R, L283I, R284K, E291D, V292I, I293V, E297A, P321S, D324E, G335D, R356K, M357R, G359S, A371V, I375V, A376S, T377M, S379C, K390R, T403M, E432D, V435I, E449K |
| >06TG.HT247| codons 1-449 PISPIDTVPVKLKPGMDGPRVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPI FAIKKKDSSKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPSIFQASMTKILEPFRTNNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFATPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKEDWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLIKGTKALTDIVPLTAEAE LELAENREILKEPVHGVYYDSSKELIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKRRSA HTNDVKQLTEVVQKVSMECIVIWGKTPKFRLPIQKETWEAWWMEYWQATWIPEWEFVNTP PLVKLWYQLEKDPIIGAETFYVDGAANRK |
References
| Author | Title | Citation |
| Yaotse, DA | Genetic characterization of HIV-1 strains in Togo reveals a high genetic complexity and genotypic drug-resistance mutations in ARV naive patients. | Infect Genet Evol, 2009 |