<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
HT143 06TG.HT143 Togo 2006 HIV1 G Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, K20I, E35D, M36I, L63T, I64L, C67S, H69K, V82I, L89M  
>06TG.HT143| codons 1-99
PQITLWQRPLVTVKIGGQLIEALLDTGADDTVLEDINLPGRWKPKMIGGIGGFIKVRQYD
QITLEISGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        K11E, K20R, V35T, T39N, E40D, V60I, D121H, K122E, D123S, K173T, D177E, T200A, R211K, V245Q, E248D, K275Q, T286A, E291D, V292I, I293V, E297A, L301M, I329V, Q334L, F346H, R356K, M357R, R358G, G359S, A371V, S379G, T386V, K390R, E396D, A400T, K431T  
>06TG.HT143| codons 1-434
PISPIETVPVELKPGMDGPRVKQWPLTEEKIKALTEICNDMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
HESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTQNPEIVI
YQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYAGIQVKQLCKLLRGAKALTDIVPLTAEAE
MELAENREILKEPVHGVYYDPSKDLIAEVQKQGLGQWTYQIYQEPHKNLKTGKYAKRGSA
HTNDVKQLTEVVQKIATEGIVIWGKVPKFRLPIQKDTWETWWTEYWQATWIPEWEFVNTP
PLVKLWYQLETEPI

References
Author Title Citation
Yaotse, DA Genetic characterization of HIV-1 strains in Togo reveals a high genetic complexity and genotypic drug-resistance mutations in ARV naive patients. Infect Genet Evol, 2009