<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
HT088 06TG.HT088 Togo 2006 HIV1 CRF02_AG Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    Q2QH, T4TP, I13A, K14R, L19LI, K20I, M36I, N37ND, R41K, L63LH, I64IM, C67CS, H69K, K70KR, L89IM  
>06TG.HT088| codons 1-99
PHIPLWQRPLVTARIGGQIIEALLDTGADDTVLEEIDLPGKWKPKMIGGIGGFIKVRQYD
QIHMEISGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        K11KT, T39A, S48E, V60I, D123N, I135T, S162A, K173T, Q174K, D177E, I195IL, T200A, Q207E, R211K, V245Q, D250E, K281R, L283LI, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357R, G359S, A371L, I375V, S379G, K390R, A400T, T403M, E432D F227FV
>06TG.HT088| codons 1-435
PISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALVEICAEMEKEGKIEKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DKNFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPEIVI
YQYMDDLYVGSDLELGQHRAKIEELREHLLKWGFTTPDKKHQKEPPVLWMGYELHPDKWT
VQPIQLPEKESWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLIRGAKALTDIVTLTEEAE
LELAENREILKEPVHGVYYDPTKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKRRSA
HTNDVKQLTELVQKVATEGIVIWGKTPKFRLPIQKETWETWWMEYWQATWIPEWEFVNTP
PLVKLWYQLEKDPIV

References
Author Title Citation
Yaotse, DA Genetic characterization of HIV-1 strains in Togo reveals a high genetic complexity and genotypic drug-resistance mutations in ARV naive patients. Infect Genet Evol, 2009