<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
HT086 06TG.HT086 Togo 2006 HIV1 G Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    T12P, I13V, I15V, L19I, K20I, M36I, R41K, L63H, C67S, H69K, V82I, L89M  
>06TG.HT086| codons 1-99
PQITLWQRPLVPVKVGGQIIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD
QIHIEISGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        K20R, V21I, V35T, K43N, V60I, D121Y, K122E, S162A, K173T, Q174KN, D177E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, Q278H, K281R, T286A, E291D, V292I, I293V, P294S, E297A, L301M, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A371V, V381I, T386I, Q394R, A400V, E404D, K431T, V435I, G436R  
>06TG.HT086| codons 1-437
PISPIETVPVKLKPGMDGPRIKQWPLTEEKIKALTEICTEMENEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
YEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTNNPEIVI
YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRHLCRLLRGAKALTDIVSLTAEAE
MELAENREILKEPVHGVYYDPSKDLIAEVQKQGLDQWTYQIYQEPYKNLKTGKYAKRGSA
HTNDVKQLTEVVQKIATESIIIWGKIPKFKLPIRKETWEVWWTDYWQATWIPEWEFVNTP
PLVKLWYQLETEPIIRA

References
Author Title Citation
Yaotse, DA Genetic characterization of HIV-1 strains in Togo reveals a high genetic complexity and genotypic drug-resistance mutations in ARV naive patients. Infect Genet Evol, 2009