Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| HT038 | 06TG.HT038 | Togo | 2006 | HIV1 | CRF02_AG | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K14R, K20I, E35N, M36I, R41K, I64L, H69K, L89M |
| >06TG.HT038| codons 1-99 PQITLWQRPLVTVRIGGQLIEALLDTGADDTVLENINLPGKWKPKMIGGIGGFIKVRQYD QILLEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35K, E36D, V60I, D121H, K122E, D123DE, I135L, S162A, K173T, Q174K, D177E, T200A, Q207E, V245Q, K275Q, K277R, T286A, E291D, V292I, I293V, P294T, L295M, S322A, G335D, R356K, M357K, G359S, K366R, T369A, A371V, I375V, A376V, V381I, K390R, K395R, A400T, T403M, E432D |
| >06TG.HT038| codons 1-434 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALKDICTEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL HEEFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIQVRQLCKLLRGAKALTDIVTMTEEAE LELAENREILKEPVHGVYYDPAKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSA HTNDVRQLAEVVQKVVTESIIIWGKTPKFRLPIQRETWETWWMEYWQATWIPEWEFVNTP PLVKLWYQLEKDPI |
References
| Author | Title | Citation |
| Yaotse, DA | Genetic characterization of HIV-1 strains in Togo reveals a high genetic complexity and genotypic drug-resistance mutations in ARV naive patients. | Infect Genet Evol, 2009 |