<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
TR92 TR92 Burkina Faso 2005 HIV1 CRF02_AG Plasma None

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        V35T, D123E, I135T, T139A, S162A, K173T, Q174R, I178M, T200A, Q207E, L210M, R211K, V245Q, L246M, K277R, T286A, E291D, I293V, P294T  
>TR92| codons 1-319
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DKEFRKYTAFTIPSTNNEAPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTRNPDMVI
YQYMDDLYVGSDLEIGQHRAKIEELREHLMKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQMPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGAKALTDVVTLTEEAE
LELAENREILKEPVHGVYY

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    T12A, I13V, K14R, I15V, G17E, K20I, E35D, M36I, N37D, L63P, I64M, H69K, L89M  
>TR92| codons 1-99
PQITLWQRPLVAVRVGEQLIEALLDTGADDTVLEDIDLPGRWKPKMIGGIGGFIKVRQYD
QIPMEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

References
Author Title Citation
Tebit, DM Analysis of the diversity of the HIV-1 pol gene and drug resistance associated changes among drug-naive patients in Burkina Faso. J Med Virol, 2009