Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA1800 | CA13472 | U.S. | 1999 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT+ 3TC | 16 |
2 | RTV+ AZT+ 3TC | 30 |
3 | RTV+ DDI+ D4T | 52 |
4 | SQV+ RTV+ AZT+ 3TC | 38 |
5 | Unknown | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
M46L, I54V, V82A, I84V, L90M | L23I | L10I, R57K, L63P, A71V, Q92K |
>CA13472| codons 1-99 PQITLWQRPIVTIKIGGQLKEAILDTGADDTVLEEMNLPGRWKPKLIGGIGGFVKVKQYD QIPIEICGHKVIGTVLVGPTPANVIGRNLMTKIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, D67N, M184V, L210W, T215Y | E6D, V8I, K43Q, V118I, K122KE, I135V, I178IM, V245E | K281KE |
>CA13441| codons 1-297 PISPIDTIPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEQEGKISKIGPENPYNTPV FAIKKKNSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPL DEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDMVI YQYVDDLYVGSDLEIGQHRTKIEELRQHLWRWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCELLRGTKALTEVIPLTE |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |