<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
178-15 178-15 Cameroon 2004 HIV1 G Plasma None

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        V35T, K49R, V60I, T69S, D123S, I142V, K173T, Q174K, D177E, Q207D, R211K, V245Q, E248D, D250E, S251N, A272P, T286A, E291D, V292I, I293V, D324E, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, T386V, Q394R, A400V, Q428R, K431T, V435L, F440Y, V458I, R463K, V466I, V467I, S468T, L469I, T470Q, D471E, Q480H, H483Q, L491S, L503I, K512R, S519N, A534T, I542V, V548VI, A554S  
>178-15| codons 1-560
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPI
FAIKKKDSSKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DKSFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEIVI
YQYMDDLYVGSDLEIGQHRTKIEELRDHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQLPDKENWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEAE
LELAENREILKEPVHGVYYDPSKELIAEVQKQGLDQWTYQIYQEPYKNLKTGKYAKRGSA
HTNDVKQLTEAVQKIATESIVIWGKVPKFKLPIRKETWEVWWTEYWQATWIPEWEFVNTP
PLVKLWYRLETEPILGAETYYVDGAANRETKLGKAGYITDRGKQKIITIQETTNQKTELH
AIQLALQDSGSEVNIVTDSQYAIGIIQAQPDRSESELVNQIIEQLIKKEKVYLTWVPAHK
GVGGNEQIDKLVSSGIRKVL

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, K14R, K20I, E35Q, M36I, N37E, R41K, R57K, I62V, L63P, C67E, H69K, V75I, V82I, L89M  
>178-15| codons 1-99
PQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEQIELPGKWKPKMIGGIGGFIKVKQYD
QVPIEIEGKKAIGTILVGPTPINIIGRNMLTQIGCTLNF

References
Author Title Citation
Yamaguchi, J HIV type 1 group M subtype G in Cameroon: Five genome sequences. ARHR, 2009