Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
TMS301 | TMS301 | Tanzania | 2005 | HIV1 | A | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63S, I64L, H69K, I72T, L89M |
>TMS301| codons 1-99 PQITLWQRPLVTVRIEGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD QISLEICGKKATGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, V60I, K122E, D123G, I135T, K173A, Q174K, D177E, V179VI, Q207A, R211S, F214L, D250E, A272P, T286A, E291D, I293V, V314VM, S322A, G335D, M357K, G359S, A360AT |
>TMS301| codons 1-361 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEGFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIII YQYMDDLYVGSDLEIGQHRTKIEELRAHLLSWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDVVPLTEEAE LELAENREILKEPMHGVYYDPAKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRST H |
References
Author | Title | Citation |
Nyombi, BM | Diversity of human immunodeficiency virus type 1 subtypes in Kagera and Kilimanjaro regions, Tanzania. | ARHR, 2008 |