Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
TMS147 | TMS147 | Tanzania | 2005 | HIV1 | A | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M |
>TMS147| codons 1-99 PQITLWQRPVVTVRIEGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35IT, T39TS, K122E, D123S, I135T, I142V, K173A, Q174K, D177E, V179I, Q207A, R211S, V245Q, A272P, T286A, E291D, P294T, E312N, V314M, G335D, M357R, R358K, G359S, K366R, T369A, A371V, I375V, A376V, T377L, S379A |
>TMS147| codons 1-379 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICSEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIII YQYMDDLYVGSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDVITLTEEAE LELAENREILKNPMHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARRKSA HTNDVRQLAEVVQKVVLEA |
References
Author | Title | Citation |
Nyombi, BM | Diversity of human immunodeficiency virus type 1 subtypes in Kagera and Kilimanjaro regions, Tanzania. | ARHR, 2008 |