Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
TMS132 | TMS132 | Tanzania | 2005 | HIV1 | D | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | NVP | NA |
2 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, K20R, M36I, R41K, R57RK, D60DE, I62V, L63LHQ, I64V |
>TMS132| codons 1-99 PQITLWQRPLVTVKIGGQLREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVKQYE QVQVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, E40D, K49R, V60I, K122E, D123S, D177E, I178M, Q207A, R211S, V245K, D250E, A272P, K277R, L282C, L283I, T286A, I293V, Q334H, G335D, P345Q, F346Y, R356K, A360T |
>TMS132| codons 1-362 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVI YQYMDDLYVGSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKCIRGAKALTEVVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEQYKNLKTGKYAKMRGT HT |
References
Author | Title | Citation |
Nyombi, BM | Diversity of human immunodeficiency virus type 1 subtypes in Kagera and Kilimanjaro regions, Tanzania. | ARHR, 2008 |