<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
TBK080 TBK080 Tanzania 2005 HIV1 D Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, K14KR, I15V, G16E, K20M, P39S, I62IV, L63LF, I64V, V82I G40K
>TBK080| codons 1-99
PQITLWQRPLVTVRVEGQLMEALLDTGADDTVLEEMNLSKRWKPKMIGGIGGFIKVRQYD
QVFVEICGHKAIGTVLVGPTPINIIGRNLLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        I5V, V35T, E40D, I47L, K49R, V60I, D121Y, K122E, E169D, D177E, T200R, Q207E, R211K, P243PS, V245K, K249KQ, D250E, S251DN, A272P, K277R, L282C, L283I, T286A, I293V, G335D, P345Q, F346Y, R356K, A360T  
>TBK080| codons 1-362
PISPVETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKLSRIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
YEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILDPFRKQNPEIVI
YQYMDDLYVGSDLEIGQHRRKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQSIKLPEQENWTVNDIQKLVGKLNWASQIYPGIKVRQLCKCIRGAKALTEVVPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEQYKNLKTGKYAKMRGT
HT

References
Author Title Citation
Nyombi, BM Diversity of human immunodeficiency virus type 1 subtypes in Kagera and Kilimanjaro regions, Tanzania. ARHR, 2008