| Time-point | Gene | Mutations |
|---|
| 1 | RT | 35IV, 60IV, 67N, 69D, 104NK, 123E, 135T, 178M, 200A, 207G, 211K, 215ST |
| 2 | PR | 57K, 63P, 71V, 72T, 93L |
| 2 | RT | 60I, 67N, 69D, 101QK, 103N, 108IV, 123E, 135T, 178M, 184V, 196RG, 200A, 207G, 211K, 230VM |
| 3 | PR | 13V, 33F, 43NK, 54LI, 57K, 58EQ, 63P, 71V, 76VL, 93L |
| 3 | RT | 67N, 69D, 104N, 123E, 135T, 178M, 200A, 207EG, 210WL, 211K, 215Y |
| 4 | PR | 33F, 57K, 58E, 63P, 71V, 76V, 90M, 93L |
| 4 | RT | 60I, 67N, 69D, 101P, 103S, 123E, 135T, 178M, 200A, 207G, 211K |