Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

HIV Home HBVseq HBV RT Mutations Blast Hits DB Release Notes

HBV RT: BLAST Hits

AuthorsTitleCitationE-value# in HBVDB# in Gb% in HBVDBAnnotation
Preikschat (1999) Hepatitis B virus genomes from long-term immunosuppressed virus carriers are modified by specific mutations in several regions J. Gen. Virol. 80 (Pt 10), 2685-2691 (1999) 0 11 11 100 HBVDB

Download amino acid sequences: aligned
Download nucleic acid sequences: aligned or unaligned

AccessionCountryColleDateGBCloneNameGBNoteGenotypeSEMutList
AF143298     7720-G8 amplified by PCR; contains a deletion in C gene, aninsertion in X gene/core promoter, and a prematuretermination codon in pre-S1 region A 1 344 143A,219A
AF143299     7744-G9 amplified by PCR; contains a deletion in C gene, adeletion in pre-S1/2 region removing the pre-S2 startcodon, a premature termination codon in pre-S1 region, anda deletion in X gene/core promoter A 1 344 38T
AF143300     7832-G4 amplified by PCR; contains a deletion in C gene, adeletion in pre-S1/2 region removing the pre-S2 startcodon, a point mutation in the X gene start codon, and aninsertion in core promoter A 1 344 7G,122D,219A
AF143301     BW1903 amplified by PCR; contains a deletion in pre-S1region, a premature termination codon in S gene, and aduplication plus a deletion in the X gene/core promoter A 1 344 7G,53S,191I
AF143302     HD1402 amplified by PCR; contains a deletion in C gene, adeletion in pre-S2 region, a premature termination codonin pre-S1 region, and a premature termination codon in Sgene A 1 344 53V,129V,219A,253V
AF143303     HD1406 amplified by PCR; contains a deletion in C gene, adeletion in pre-S2 region, a premature termination codonin S gene, a premature termination codon in P gene, and aninsertion in X gene/core promoter A 1 344 53V,219A,253V,263E,329G
AF143304     HD319 amplified by PCR; contains a deletion in C gene, adeletion in pre-S2 region, and a deletion in X gene/corepromoter A 1 344 129V,219A,253V
AF143305     RM501 amplified by PCR; contains a deletion in C gene/Pgene, a deletion in pre-S1/2 region removing the pre-S2start codon, a premature termination codon in pre-S1region, and a duplication plus deletion in X gene/corepromoter A 1 344 53T,219A
AF143306     RM517 amplified by PCR; contains a premature terminationcodon in C gene, a deletion in pre-S1/2 region removingthe pre-S2 start codon, a premature termination codon in Sgene, and a duplication plus insertion in X gene/corepromoter A 1 344 7G,53S,128N,219A,275E,312C
AF143307     RM518 amplified by PCR; contains a deletion in C gene, adeletion in pre-S2 region, a premature termination codonin S gene, and a deletion in X gene/core promoter A 1 344 7A,103V
AF143308     WB1254 amplified by PCR; contains a premature terminationcodon in C gene, a deletion in pre-S1 region, a prematuretermination codon in S gene, and a duplication plus adeletion in the X gene/core promoter A 1 344 7G,53S,191I

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