Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

HIV Home HBVseq HBV RT Mutations Blast Hits DB Release Notes

HBV RT: BLAST Hits

AuthorsTitleCitationE-value# in HBVDB# in Gb% in HBVDBAnnotation
Lukhwareni (2007) Hepatitis B virus (HBV) polymerase sequences from South African HIV co-infected treatment naive individuals Unpublished 1e-117 38 76 50 HBVDB

Download amino acid sequences: aligned
Download nucleic acid sequences: aligned or unaligned

AccessionCountryColleDateGBCloneNameGBNoteGenotypeSEMutList
AM712841 South Africa:Pretori     HIV co-infected, treatment naive patient A 127 319 133X,194V,219P,223X,230X,231F,233*,243G
AM712842 South Africa:Pretori     HIV co-infected, treatment naive patient A 124 322 128P,129L,163I,217L,253V,309K
AM712843 South Africa:Pretori     HIV co-infected, treatment naive patient A 127 322 129L,163I,217L,253V,266I
AM712844 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 320 122H,125E,129L,163I,217L,253V
AM712845 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 319 121L,122H,125S,126T,129*,131N_K,137X,163I,217L,253V,266I
AM712846 South Africa:Pretori     HIV co-infected, treatment naive patient A 120 323 122H,127G_HP,128A,129K,163I,217L,253V,266I
AM712847 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 325 122H,129L,163I,217L,253V,266I,320X,324P
AM712848 South Africa:Pretori     HIV co-infected, treatment naive patient A 119 320 120S,122H,129L,163I,217L,253V,266I
AM712849 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 328 122H,129L,131N_QN,163I,217L,253V,266I,320V,321S,322L
AM712850 South Africa:Pretori     HIV co-infected, treatment naive patient A 126 310 128S,129L,163I,190G,217L,232X,253V,258X,286X,293X,299X,304X
AM712851 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 308 122H,125E,129L,133X,163I,217L,253V
AM712852 South Africa:Pretori     HIV co-infected, treatment naive patient G 124 325 133X,179X,186X,208X,232X,270N,271E,324F
AM712853 South Africa:Pretori     HIV co-infected, treatment naive patient A 131 321 190G,266I
AM712854 South Africa:Pretori     HIV co-infected, treatment naive patient A 123 322 124T,125R,129L,153R,163I,217L,226I,253V,263E,266I
AM712855 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 321 122H,125E,127K,128N,129L,130A,131K,132G,133R,144P,163I,217L,253V
AM712856 South Africa:Pretori     HIV co-infected, treatment naive patient A 120 325 120Q,122H,125E,129L,163I,217L,253V,321S,322L,324F
AM712857 South Africa:Pretori     HIV co-infected, treatment naive patient A 124 325 125E,129L,163I,217L,253V,320V,321T,322F,324P
AM712858 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 325 122H,125E,129L,163I,217L,253V,320V,321H,322F,324P
AM712859 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 325 122H,125E,129L,163I,217L,253V,321S,322L
AM712860 South Africa:Pretori     HIV co-infected, treatment naive patient A 131 319 134H,136T,137T,138K,163I,217L,253V
AM712861 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 344 122H,129L,153R,163I,217L,253V,266R,324P,325P_P,332N,333Q
AM712862 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 325 122H,125E,129L,163I,217L,253V,320V,321S,322L
AM712863 South Africa:Pretori     HIV co-infected, treatment naive patient A 127 323 129L,163I,217L,253V,322I
AM712864 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 325 122H,126H,128H,129P,130A,131D,163I,188R,217L,253V,270R,320X,322S
AM712865 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 323 122H,125E,129L,163I,217L,253V,320X
AM712866 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 325 122H,125E,129L,134Y,163I,217L,253V,321S,322L
AM712867 South Africa:Pretori     HIV co-infected, treatment naive patient A 123 321 128P,129L,129L_L,132V,163I,217L,253V,269L,271C
AM712868 South Africa:Pretori     HIV co-infected, treatment naive patient A 128 323 128S,129L,130A,131K,133Q,134H,137X,138K,163I,217L,253V,322I
AM712869 South Africa:Pretori     HIV co-infected, treatment naive patient A 127 321 129L,130S,131K,137X,138K,154E,155M,163I,217L,253V
AM712870 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 325 122H,129L,163I,217L,253V,266I,321Y,322F,324F
AM712871 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 323 122H,125E,129L,163I,217L,253V
AM712872 South Africa:Pretori     HIV co-infected, treatment naive patient A 123 327 129L,163I,217L,253V,266I,320X,326P,327H
AM712873 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 323 122H,125E,129L,134E,145L,155W,162L,163L,166L,168*,190W,200G,201L,206E,207E,208E,209V,213A,214E,217L,230P,245C,253G,257G,279H,286G,287*,291G,292S,294V,296L,298L,303*,307D,311I,316R,322A
AM712874 South Africa:Pretori     HIV co-infected, treatment naive patient A 121 325 122H,129L,163I,204I,217L,253V,266I,320X,324P
AM712875 South Africa:Pretori     HIV co-infected, treatment naive patient A 130 320 138G,163I,217L,253V,267L
AM712876 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 325 122H,125E,129L,163I,217L,253V,293P,324L
AM712877 South Africa:Pretori     HIV co-infected, treatment naive patient A 120 325 120Q,122H,125E,129L,163I,217L,253V,321S,322F
AM712878 South Africa:Pretori     HIV co-infected, treatment naive patient A 122 324 122H,125E,129L,132X,163I,217L,232X,253V,286X
EF619353 South Africa       A 127 319 129L,133X,194V,219P,223X,230X,231F,233*,243G
EF619354 South Africa       A 124 322 128P,129L,163I,217L,253V,309K
EF619355 South Africa       A 127 322 129L,163I,217L,253V,266I
EF619356 South Africa       A 122 320 122H,125E,129L,163I,217L,253V
EF619357 South Africa       A 121 319 121L,122H,125S,126T,129*,131N_K,137X,163I,217L,253V,266I
EF619358 South Africa       A 120 323 122H,127G_HP,128A,129K,163I,217L,253V,266I
EF619359 South Africa       A 121 325 122H,129L,163I,217L,253V,266I,320X,324P
EF619360 South Africa       A 119 320 120S,122H,129L,163I,217L,253V,266I
EF619361 South Africa       A 122 328 122H,129L,131N_QN,163I,217L,253V,266I,320V,321S,322L
EF619362 South Africa       A 126 310 128S,129L,163I,190G,217L,232X,253V,258X,286X,293X,299X,304X
EF619363 South Africa       A 121 308 122H,125E,129L,133X,163I,217L,253V
EF619364 South Africa       G 124 325 133X,179X,186X,208X,232X,270N,271E,324F
EF619365 South Africa       A 131 321 190G,266I
EF619366 South Africa       A 123 322 124T,125R,129L,153R,163I,217L,226I,253V,263E,266I
EF619367 South Africa       A 122 321 122H,125E,127K,128N,129L,130A,131K,132G,133R,144P,163I,217L,253V
EF619368 South Africa       A 120 325 120Q,122H,125E,129L,163I,217L,253V,321S,322L,324F
EF619369 South Africa       A 124 325 125E,129L,163I,217L,253V,320V,321T,322F,324P
EF619370 South Africa       A 121 325 122H,125E,129L,163I,217L,253V,320V,321H,322F,324P
EF619371 South Africa       A 122 325 122H,125E,129L,163I,217L,253V,321S,322L
EF619372 South Africa       A 131 319 134H,136T,137T,138K,163I,217L,253V
EF619373 South Africa       A 122 344 122H,129L,153R,163I,217L,253V,266R,324P,325P_P,332N,333Q
EF619374 South Africa       A 122 325 122H,125E,129L,163I,217L,253V,320V,321S,322L
EF619375 South Africa       A 127 323 129L,163I,217L,253V,322I
EF619376 South Africa       A 121 325 122H,126H,128H,129P,130A,131D,163I,188R,217L,253V,270R,320X,322S
EF619377 South Africa       A 122 323 122H,125E,129L,163I,217L,253V,320X
EF619378 South Africa       A 121 325 122H,125E,129L,134Y,163I,217L,253V,321S,322L
EF619379 South Africa       A 123 321 128P,129L,129L_L,132V,163I,217L,253V,269L,271C
EF619380 South Africa       A 128 323 128S,129L,130A,131K,133Q,134H,137X,138K,163I,217L,253V,322I
EF619381 South Africa       A 127 321 129L,130S,131K,137X,138K,154E,155M,163I,217L,253V
EF619382 South Africa       A 121 325 122H,129L,163I,217L,253V,266I,321Y,322F,324F
EF619383 South Africa       A 122 323 122H,125E,129L,163I,217L,253V
EF619384 South Africa       A 123 327 129L,163I,217L,253V,266I,320X,326P,327H
EF619385 South Africa       A 122 323 122H,125E,129L,134E,145L,155W,162L,163L,166L,168*,190W,200G,201L,206E,207E,208E,209V,213A,214E,217L,230P,245C,253G,257G,279H,286G,287*,291G,292S,294V,296L,298L,303*,307D,311I,316R,322A
EF619386 South Africa       A 121 325 122H,129L,163I,204I,217L,253V,266I,320X,324P
EF619387 South Africa       A 130 320 138G,163I,217L,253V,267L
EF619388 South Africa       A 122 325 122H,125E,129L,163I,217L,253V,293P,324L
EF619389 South Africa       A 120 325 120Q,122H,125E,129L,163I,217L,253V,321S,322F
EF619390 South Africa       A 122 324 122H,125E,129L,132X,163I,217L,232X,253V,286X

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