Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

HIV Home HBVseq HBV RT Mutations Blast Hits DB Release Notes

HBV RT: BLAST Hits

AuthorsTitleCitationE-value# in HBVDB# in Gb% in HBVDBAnnotation
Garmiri (2009) Deletions and recombinations in the core region of hepatitis B virus genotype E strains from asymptomatic blood donors in Guinea, west Africa J. Gen. Virol. 90 (PT 10), 2442-2451 (2009) 0 94 94 100 HBVDB

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AccessionCountryColleDateGBCloneNameGBNoteGenotypeSEMutList
GQ161753 Ghana 2000   subgenotype A3/Egenotype: A/E recombinant A 1 344 7T,8D,122H,129L,139R,164M
GQ161754 Ghana 2000   subgenotype D/Egenotype: D/E recombinant D 1 344 38S,164M,237T,266M,267H
GQ161755 Guinea 2006   subgenotype Egenotype: E E 1 344 317A,344K
GQ161756 Guinea 2006   subgenotype Egenotype: E E 1 344 118T
GQ161757 Guinea 2006   subgenotype Egenotype: E E 1 344 15K,135Y,162V,238T
GQ161758 Guinea 2006   subgenotype Egenotype: E E 1 344 53N,248H,322L,333N,336M
GQ161759 Guinea 2006   subgenotype Egenotype: E E 1 344 142I,248H,333N
GQ161760 Guinea 2006   subgenotype Egenotype: E E 1 344 112L,129M,248H
GQ161761 Guinea 2006   subgenotype Egenotype: E E 1 344 27I
GQ161762 Guinea 2006   subgenotype Egenotype: E E 1 344 291A
GQ161763 Guinea 2006   subgenotype Egenotype: E E 1 344  
GQ161764 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161765 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,270Q
GQ161766 Guinea 2006   subgenotype Egenotype: E E 1 344 53N,248H,322L,333N,336M
GQ161767 Guinea 2006   subgenotype A3/Egenotype: A/E recombinant A 1 344 8D,218D,219A,271N,313S,332R,333Q
GQ161768 Guinea 2006   subgenotype Egenotype: E E 1 344 118T,213T,220I,333Q
GQ161769 Guinea 2006   subgenotype Egenotype: E E 1 344 91I,248H,270Q
GQ161770 Guinea 2006   subgenotype Egenotype: E E 1 344 50C,248H,253I,333T
GQ161771 Guinea 2006   subgenotype Egenotype: E E 1 344 194T,248H
GQ161772 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,333T
GQ161773 Guinea 2006   subgenotype Egenotype: E E 1 344 7S,248H,339F
GQ161774 Guinea 2006   subgenotype Egenotype: E E 1 344 53N,248H,322L,333N,336M
GQ161775 Guinea 2006   subgenotype A3/Egenotype: A/E recombinant E 1 344 47PS,120MR,130PQ,139HKNQ,238H,248H,253IV,263DE,266GIRV,267KM,271DN,278IV
GQ161776 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161777 Guinea 2006   subgenotype Egenotype: E E 1 344 248HN
GQ161778 Guinea 2006   subgenotype Egenotype: E E 1 344  
GQ161779 Guinea 2006   subgenotype Egenotype: E E 1 344 11R,91I,131D,248H,270Q
GQ161780 Guinea 2006   subgenotype Egenotype: E E 1 344  
GQ161781 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161782 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,281H
GQ161783 Guinea 2006   subgenotype Egenotype: E E 1 344 266T,275N
GQ161784 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161785 Guinea 2006   subgenotype Egenotype: E E 1 344 122L,329T,333Q
GQ161786 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161787 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,332Y,333T
GQ161788 Guinea 2006   subgenotype A3/Egenotype: A/E recombinant A 1 344 8D,53T,122H,175P,181V,251X,252X,253X,254X,255X,256X,257X,258X,259X,260X,261X,262X,263X,264X,265X,266X,267X,268X,269X,270X,271X,272X,273X,274X,275X,276X,277X,278X,279X,280X,281X,282X,283X,284X,285X,286X,287X,288X,289X,290X,291X,292X,293X,294X,295X,296X,297X,298X,299X,300X,301X,302X,303X,304X,305X,329T,337T
GQ161789 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161790 Guinea 2006   subgenotype Egenotype: E E 1 344  
GQ161791 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,253I,333T
GQ161792 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161793 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,333T
GQ161794 Guinea 2006   subgenotype Egenotype: E E 1 344 282L,337Y,342V
GQ161795 Guinea 2006   subgenotype Egenotype: E E 1 344 118T
GQ161796 Guinea 2006   subgenotype Egenotype: E E 1 344  
GQ161797 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,333Q
GQ161798 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,333T
GQ161799 Guinea 2006   subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E E 1 344  
GQ161800 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,253I,333T
GQ161801 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161802 Guinea 2006   subgenotype Egenotype: E E 1 344 7S,248H,339F
GQ161803 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,319K,333Q
GQ161804 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,333T
GQ161805 Guinea 2006   subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E E 1 344  
GQ161806 Guinea 2006   subgenotype A3/Egenotype: A/E E 1 344 238H,248H,253IV,263D,266GV,267Q,271N,278I
GQ161807 Guinea 2006   subgenotype Egenotype: E E 1 344 27I,263D
GQ161808 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161809 Guinea 2006   subgenotype Egenotype: E E 1 344 53I,248H
GQ161810 Guinea 2006   subgenotype Egenotype: E E 1 344  
GQ161811 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161812 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,267R
GQ161813 Guinea 2006   subgenotype A3genotype: A A 1 344 8D,122H,126H,271N,278I,336V
GQ161814 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161815 Guinea 2006   subgenotype Egenotype: E E 1 344 76D,266K
GQ161816 Guinea 2006   subgenotype Egenotype: E E 1 344 53N,248H
GQ161817 Guinea 2006   subgenotype Egenotype: E E 1 344  
GQ161818 Guinea 2006   subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E E 1 344  
GQ161819 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,253I,333T
GQ161820 Guinea 2006   subgenotype Egenotype: E E 1 344 11KR,91IL,248HN
GQ161821 Guinea 2006   subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E E 1 344  
GQ161822 Guinea 2006   subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E E 1 344 337D
GQ161823 Guinea 2006   subgenotype Egenotype: E E 1 344 118T
GQ161824 Guinea 2006   subgenotype Egenotype: E E 1 344 266T,275N
GQ161825 Guinea 2006   subgenotype Egenotype: E E 1 344 11R,35Q,151Y,313S
GQ161826 Guinea 2006   subgenotype Egenotype: E E 1 344 126N,241R,248H
GQ161827 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,333T
GQ161828 Guinea 2006   subgenotype Egenotype: E E 1 344 248H
GQ161829 Guinea 2006   subgenotype Egenotype: E E 1 344 333T
GQ161830 Guinea 2006   subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E E 1 344  
GQ161831 Guinea 2006   subgenotype Egenotype: E E 1 344 11R,80Q,105P,124Y,248H,288P,313S,325L,329T
GQ161832 Guinea 2006   subgenotype Egenotype: E E 1 344 56M,248H,266K
GQ161833 Guinea 2006   subgenotype Egenotype: E E 1 344 337D
GQ161834 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,332Y,333T
GQ161835 Guinea 2006   subgenotype Egenotype: E E 1 344 248H,263D,317A
GQ161836 Guinea 2006   subgenotype Egenotype: E E 1 344 1D,122L
GQ161837 Guinea 2006   subgenotype A3/Egenotype: A/E recombinant A 1 338 8D,122H,167LR,271N,313S,332I,335*
GQ161838 Guinea 2006   subgenotype A3/Egenotype: A/E recombinant A 1 297 7T,8D,71NT,122H,129L,153R,163I,164M,217L,259S,271NY,289IKRT
GQ161839 Ghana 2000 1 subgenotype A3/Egenotype: A/E recombinant E 1 235 8D,214A
GQ161840 Ghana 2000 2 subgenotype A3genotype: A A 1 235 8D,39K,122H,123H,181G
GQ161841 Ghana 2000 3 subgenotype A3/Egenotype: A/E recombinant A 1 235 7T,8D,12N,122H,123H,129L,153R,163I,164M,217L,223S
GQ161842 Ghana 2000 4 subgenotype Egenotype: E E 1 235 88L,123K
GQ161843 Ghana 2000 12 subgenotype A3genotype: A A 1 235 8D,122H,123H
GQ161844 Ghana 2000 20 subgenotype Egenotype: E E 1 235 123K,214A
GQ161845 Ghana 2000 22 subgenotype A3genotype: A A 1 235 8D,122H,123H
GQ161846 Ghana 2000 24 subgenotype A3/Egenotype: A/E recombinant E 1 235 8D,39K,123K,214A

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