| Download amino acid sequences: aligned
Download nucleic acid sequences: aligned or unaligned | |
| Accession | Country | ColleDate | GBCloneName | GBNote | Genotype | S | E | MutList |
|---|
| GQ161753 |
Ghana |
2000 |
|
subgenotype A3/Egenotype: A/E recombinant |
A |
1 |
344 |
7T,8D,122H,129L,139R,164M |
| GQ161754 |
Ghana |
2000 |
|
subgenotype D/Egenotype: D/E recombinant |
D |
1 |
344 |
38S,164M,237T,266M,267H |
| GQ161755 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
317A,344K |
| GQ161756 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
118T |
| GQ161757 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
15K,135Y,162V,238T |
| GQ161758 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
53N,248H,322L,333N,336M |
| GQ161759 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
142I,248H,333N |
| GQ161760 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
112L,129M,248H |
| GQ161761 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
27I |
| GQ161762 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
291A |
| GQ161763 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
|
| GQ161764 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161765 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,270Q |
| GQ161766 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
53N,248H,322L,333N,336M |
| GQ161767 |
Guinea |
2006 |
|
subgenotype A3/Egenotype: A/E recombinant |
A |
1 |
344 |
8D,218D,219A,271N,313S,332R,333Q |
| GQ161768 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
118T,213T,220I,333Q |
| GQ161769 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
91I,248H,270Q |
| GQ161770 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
50C,248H,253I,333T |
| GQ161771 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
194T,248H |
| GQ161772 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,333T |
| GQ161773 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
7S,248H,339F |
| GQ161774 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
53N,248H,322L,333N,336M |
| GQ161775 |
Guinea |
2006 |
|
subgenotype A3/Egenotype: A/E recombinant |
E |
1 |
344 |
47PS,120MR,130PQ,139HKNQ,238H,248H,253IV,263DE,266GIRV,267KM,271DN,278IV |
| GQ161776 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161777 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248HN |
| GQ161778 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
|
| GQ161779 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
11R,91I,131D,248H,270Q |
| GQ161780 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
|
| GQ161781 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161782 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,281H |
| GQ161783 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
266T,275N |
| GQ161784 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161785 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
122L,329T,333Q |
| GQ161786 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161787 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,332Y,333T |
| GQ161788 |
Guinea |
2006 |
|
subgenotype A3/Egenotype: A/E recombinant |
A |
1 |
344 |
8D,53T,122H,175P,181V,251X,252X,253X,254X,255X,256X,257X,258X,259X,260X,261X,262X,263X,264X,265X,266X,267X,268X,269X,270X,271X,272X,273X,274X,275X,276X,277X,278X,279X,280X,281X,282X,283X,284X,285X,286X,287X,288X,289X,290X,291X,292X,293X,294X,295X,296X,297X,298X,299X,300X,301X,302X,303X,304X,305X,329T,337T |
| GQ161789 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161790 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
|
| GQ161791 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,253I,333T |
| GQ161792 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161793 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,333T |
| GQ161794 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
282L,337Y,342V |
| GQ161795 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
118T |
| GQ161796 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
|
| GQ161797 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,333Q |
| GQ161798 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,333T |
| GQ161799 |
Guinea |
2006 |
|
subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E |
E |
1 |
344 |
|
| GQ161800 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,253I,333T |
| GQ161801 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161802 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
7S,248H,339F |
| GQ161803 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,319K,333Q |
| GQ161804 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,333T |
| GQ161805 |
Guinea |
2006 |
|
subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E |
E |
1 |
344 |
|
| GQ161806 |
Guinea |
2006 |
|
subgenotype A3/Egenotype: A/E |
E |
1 |
344 |
238H,248H,253IV,263D,266GV,267Q,271N,278I |
| GQ161807 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
27I,263D |
| GQ161808 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161809 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
53I,248H |
| GQ161810 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
|
| GQ161811 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161812 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,267R |
| GQ161813 |
Guinea |
2006 |
|
subgenotype A3genotype: A |
A |
1 |
344 |
8D,122H,126H,271N,278I,336V |
| GQ161814 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161815 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
76D,266K |
| GQ161816 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
53N,248H |
| GQ161817 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
|
| GQ161818 |
Guinea |
2006 |
|
subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E |
E |
1 |
344 |
|
| GQ161819 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,253I,333T |
| GQ161820 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
11KR,91IL,248HN |
| GQ161821 |
Guinea |
2006 |
|
subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E |
E |
1 |
344 |
|
| GQ161822 |
Guinea |
2006 |
|
subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E |
E |
1 |
344 |
337D |
| GQ161823 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
118T |
| GQ161824 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
266T,275N |
| GQ161825 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
11R,35Q,151Y,313S |
| GQ161826 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
126N,241R,248H |
| GQ161827 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,333T |
| GQ161828 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H |
| GQ161829 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
333T |
| GQ161830 |
Guinea |
2006 |
|
subgenotype E; isolate showed evidence of having amixed population of viruses but the complete sequence ofthe wild-type variant could not be obtainedgenotype: E |
E |
1 |
344 |
|
| GQ161831 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
11R,80Q,105P,124Y,248H,288P,313S,325L,329T |
| GQ161832 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
56M,248H,266K |
| GQ161833 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
337D |
| GQ161834 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,332Y,333T |
| GQ161835 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
248H,263D,317A |
| GQ161836 |
Guinea |
2006 |
|
subgenotype Egenotype: E |
E |
1 |
344 |
1D,122L |
| GQ161837 |
Guinea |
2006 |
|
subgenotype A3/Egenotype: A/E recombinant |
A |
1 |
338 |
8D,122H,167LR,271N,313S,332I,335* |
| GQ161838 |
Guinea |
2006 |
|
subgenotype A3/Egenotype: A/E recombinant |
A |
1 |
297 |
7T,8D,71NT,122H,129L,153R,163I,164M,217L,259S,271NY,289IKRT |
| GQ161839 |
Ghana |
2000 |
1 |
subgenotype A3/Egenotype: A/E recombinant |
E |
1 |
235 |
8D,214A |
| GQ161840 |
Ghana |
2000 |
2 |
subgenotype A3genotype: A |
A |
1 |
235 |
8D,39K,122H,123H,181G |
| GQ161841 |
Ghana |
2000 |
3 |
subgenotype A3/Egenotype: A/E recombinant |
A |
1 |
235 |
7T,8D,12N,122H,123H,129L,153R,163I,164M,217L,223S |
| GQ161842 |
Ghana |
2000 |
4 |
subgenotype Egenotype: E |
E |
1 |
235 |
88L,123K |
| GQ161843 |
Ghana |
2000 |
12 |
subgenotype A3genotype: A |
A |
1 |
235 |
8D,122H,123H |
| GQ161844 |
Ghana |
2000 |
20 |
subgenotype Egenotype: E |
E |
1 |
235 |
123K,214A |
| GQ161845 |
Ghana |
2000 |
22 |
subgenotype A3genotype: A |
A |
1 |
235 |
8D,122H,123H |
| GQ161846 |
Ghana |
2000 |
24 |
subgenotype A3/Egenotype: A/E recombinant |
E |
1 |
235 |
8D,39K,123K,214A |
