Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

HIV Home HBVseq HBV RT Mutations Blast Hits DB Release Notes

HBV RT: BLAST Hits

AuthorsTitleCitationE-value# in HBVDB# in Gb% in HBVDBAnnotation
Okamoto (1999) Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes J. Gen. Virol. 69 (PT 10), 2575-2583 (1988) 1e-180 8 8 100 HBVDB

Download amino acid sequences: aligned
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AccessionCountryColleDateGBCloneNameGBNoteGenotypeSEMutList
AB033550         C 1 344 122N,267R,269L,316H,337H
AB033556       AK66 clone was derived from an asymptomatic HBVcarrier in Japan , and SK300 (Acc# AB033551), SK494 (Acc#AB033552) and SK619 (Acc# AB033553) clones were isolatedfrom her mother. C 1 344 269L,333Q,337H
AB033557         C 1 344 7I,122L,128A,223A,224V
AB033558       JYW796 clone was derived from a Japanese blooddonor. D 1 344 123D,135Y,267H,269L,332Y,336M
AB033559       PYW310 clone was derived from an apparently healthyblood donor in Papua New Guinea. D 1 344 78C,122I,129L,149K,248N,257W,263N,267H,279H
D00329 Japan   pJDW233 hypothetical EcoRI site;since the clones did not posses an EcoRI site, nucleotideswere numbered from a hypothetical EcoRI site as in the HBVDNA clones already reported;subtype: adw B 1 344 7A,131D,260W,268N,269F,271L,337T
D00330 Japan: Okinawa   pODW282 hypothetical EcoRI site;since the clones did not posses an EcoRI site, nucleotideswere numbered from a hypothetical EcoRI site as in the HBVDNA clones already reported;subtype: adw B 1 344 124N,153W,207M,272W,332T
D00331 Indonesia   pIDW420 hypothetical EcoRI site;since the clones did not posses an EcoRI site, nucleotideswere numbered from a hypothetical EcoRI site as in the HBVDNA clones already reported;subtype: adw B 1 344 1D,7A,38S,76D,134D,238Q,267L,271Q,332N

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